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  • Interactions of glycine betaine with proteins: insights from volume and compressibility measurements.

Interactions of glycine betaine with proteins: insights from volume and compressibility measurements.

Biochemistry (2013-01-09)
Yuen Lai Shek, Tigran V Chalikian
摘要

We report the first application of volume and compressibility measurements to characterization of interactions between cosolvents (osmolytes) and globular proteins. Specifically, we measure the partial molar volumes and adiabatic compressibilities of cytochrome c, ribonuclease A, lysozyme, and ovalbumin in aqueous solutions of the stabilizing osmolyte glycine betaine (GB) at concentrations between 0 and 4 M. The fact that globular proteins do not undergo any conformational transitions in the presence of GB provides an opportunity to study the interactions of GB with proteins in their native states within the entire range of experimentally accessible GB concentrations. We analyze our resulting volumetric data within the framework of a statistical thermodynamic model in which each instance of GB interaction with a protein is viewed as a binding reaction that is accompanied by release of four water molecules. From this analysis, we calculate the association constants, k, as well as changes in volume, ΔV(0), and adiabatic compressibility, ΔK(S0), accompanying each GB-protein association event in an ideal solution. By comparing these parameters with similar characteristics determined for low-molecular weight analogues of proteins, we conclude that there are no significant cooperative effects involved in interactions of GB with any of the proteins studied in this work. We also evaluate the free energies of direct GB-protein interactions. The energetic properties of GB-protein association appear to scale with the size of the protein. For all proteins, the highly favorable change in free energy associated with direct protein-cosolvent interactions is nearly compensated by an unfavorable free energy of cavity formation (excluded volume effect), yielding a modestly unfavorable free energy for the transfer of a protein from water to a GB/water mixture.

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Sigma-Aldrich
核糖核酸酶A 来源于牛胰腺, for molecular biology, ≥70 Kunitz units/mg protein, lyophilized
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核糖核酸酶A 来源于牛胰腺, Type I-A, powder, ≥60% RNase A basis (SDS-PAGE), ≥50 Kunitz units/mg protein
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核糖核酸酶A 来源于牛胰腺, Type III-A, ≥85% RNase A basis (SDS-PAGE), 85-140 Kunitz units/mg protein
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核糖核酸酶A 来源于牛胰腺, (Solution of 50% glycerol, 10mM Tris-HCL pH 8.0)
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核糖核酸酶A 来源于牛胰腺, Type I-AS, 50-100 Kunitz units/mg protein
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核糖核酸酶B 来源于牛胰腺, BioReagent, ≥50 Kunitz units/mg protein, ≥80% (SDS-PAGE)
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核糖核酸酶A 来源于牛胰腺, Type XII-A, ≥90% (SDS-PAGE), 75-125 Kunitz units/mg protein
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核糖核酸酶A 来源于牛胰腺, Type II-A, ≥60% (SDS-PAGE), >= 60 Kunitz units/mg protein
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核糖核酸酶A 来源于牛胰腺, Type X-A, ≥90% (SDS-PAGE), ≥70 Kunitz units/mg protein
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核糖核酸酶A 来源于牛胰腺, 4×cryst., ~70 U/mg (acc. to Kunitz)
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核糖核酸酶A 来源于牛胰腺, 90%, powder, white, ~80 U/mg
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Ribonuclease A-agarose, ammonium sulfate suspension, 400-1,000 units/g agarose (One ml gel will yield 12-30 units)